PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_018552-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 152aa    MW: 17175 Da    PI: 10.6739
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_018552-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.34.8e-11113142233
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT-- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCp 33 
                     D+y+WrKY qK++kgs++pr  Y C +++C 
  NNU_018552-RA 113 ADEYSWRKYAQKPIKGSPHPR--YICLFPTCL 142
                    7********************..899999996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081110.958107133IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-9108141IPR003657WRKY domain
SuperFamilySSF1182902.62E-8110142IPR003657WRKY domain
SMARTSM007740.0017112149IPR003657WRKY domain
PfamPF031061.9E-6114134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MKLQADVMFG RSNNSINLKF DNSNCTATMS SNRSFISSLS MDGTVSNLDV KAFHLIRAPQ  60
SSNRNSQQTP KRRCFGRGED GMIGRYSLLS SISVFRKLRV KSIKVPTISN KLADEYSWRK  120
YAQKPIKGSP HPRYICLFPT CLMILMCIIV VD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278127.11e-52PREDICTED: probable WRKY transcription factor 21
RefseqXP_010278128.11e-52PREDICTED: probable WRKY transcription factor 21
SwissprotQ93WU65e-32WRK74_ARATH; Probable WRKY transcription factor 74
TrEMBLF6HVI73e-51F6HVI7_VITVI; Putative uncharacterized protein
STRINGVIT_14s0081g00560.t019e-51(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.13e-33WRKY DNA-binding protein 74